NCBI BioProject collection containing SRA Experiment data and BioSamples resulting from "high frequency intestinal microbiota sampling in allogeneic bone marrow transplant patients, part of a larger systems biology project examining factors that influence antibiotic resistance, with a focus on the pathogens Vancomycin-Resistant Enterococcus and Klebsiella pneumoniae".

Description from BioProject: "This is a case control study to compare oral microbiome and virome in patients with oral cavity squamous cell carcinoma to normal patients using metagenomic shotgun sequencing." The study where the dataset originated from shows a case control study comparing the HPV genome in patients with oral cavity squamous cell carcinoma (OC-SCC) to normal patients using metagenomic...

Summary from the ENA: "Antibiotic exposure early in life, and other practices impacting the vertical transmission and ordered assembly of a diverse and balanced gut microbiota, are associated with a higher risk of immunological and metabolic disorders such as asthma and allergy, autoimmunity, obesity, and susceptibility to opportunistic infections. Here, we use a model of perinatal exposure to the...

Summary from BioProject: "Rag1 heterozygote mice and Rag1 knockout mice are infected with C.diff and given FMTs to clear infection to demonstrate the role of the immune system in C.diff infection clearance"