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Glioma (MSKCC, Clin Cancer Res 2019): Targeted sequencing on MSK-IMPACT and FMI Panels of 1004 samples (837 with matched normals) from 923 glioma patients.
- Description
This dataset contains summary data visualizations and clinical data from 1,004 samples of glioma tumors from 924 patients. The data was gathered utilizing the MSK-IMPACT targeted sequencing test. The clinical data includes tumor type (based on the opensource OncoTree ontology developed at MSK), mutation count, information about mutated genes, patient demographics, disease status, and sample details....
- Subject
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Brain NeoplasmsDNA Mutational Analysis
- Access Rights
- Free to All
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TMB and Immunotherapy (MSKCC, Nat Genet 2019): Genomic and survival data from 1661 tumor-normal pairs from 1661 patients with various cancer types sequenced with the MSK-IMPACT assay.
- Description
This dataset contains summary data visualizations and clinical data from a broad sampling of 1,661 samples of across multiple cancer types showing tumor mutational load and survival following immunotherapy from 1,661 patients. The data was gathered utilizing the MSK-IMPACT targeted sequencing test. The clinical data includes tumor type (based on the opensource OncoTree ontology developed at MSK),...
- Subject
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DNA Mutational AnalysisImmunotherapyMutationTumor Burden
- Access Rights
- Free to All
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Brain Lower Grade Glioma (TCGA, Firehose Legacy)
- Description
TCGA Brain Lower Grade Glioma. Source data from GDAC Firehose. Previously known as TCGA Provisional. This dataset contains summary data visualizations and clinical data from a broad sampling of 530 carcinomas from 516 patients. The data was gathered as part of the Broad Institute of MIT and Harvard Firehose initiative, a cancer analysis pipeline. The clinical data includes mutation count, information...
- Subject
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AstrocytomaBrain NeoplasmsDNA Mutational AnalysisGliomaOligodendroglioma
- Access Rights
- Free to All
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Glioma (MSK, Nature 2019): Targeted Sequencing of CSF samples (91 samples with 86 matched normals) from 42 glioma patients
- Description
This dataset contains the summary data visualizations and clinical data from the targed sequencing of 91 CSF samples from 42 glioma patients. Clinical data includes: Cancer Type, Number of Samples Per Patient, Mutation Count, Fraction Genome Altered Sample Type, Sex, Oncotree Code, Sample Collection Method, Somatic Status, Specimen Preservation Type. The plaintext components of the dataset can be...
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AstrocytomaGlioblastomaGliomaGliosarcomaOligodendroglioma
- Access Rights
- Free to All
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Glioma International Case Control Study (GICC)
- Authors
- Bondy, Melissa L.
- Description
Study Description from dbGaP: "The main goals of the GICC Study were: 1) to identify novel genetic risk variants for glioma, as well as validate variants implicated by previous genome-wide association studies of glioma; and 2) to explore biologically relevant gene-gene and gene-environment interactions in glioma susceptibility." Study Inclusion Criteria: "Diagnosis of histologically confirmed, supratentorial,...
- Subject
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AstrocytomaBrain NeoplasmsGlioblastomaGliomaOligodendroglioma
- Access Rights
- Application Required