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Results Found: 8
  • Deconvoluting global cytokine signaling networks in natural killer cells [ChIP-Seq]

    Authors
    Lau, Colleen M.
    Sun, Joseph C.
    Description

    Summary from the GEO: "Cytokine signaling via signal transducer and activator of transcription (STAT) proteins is crucial for optimal antiviral responses of natural killer (NK) cells. However, the pleiotropic effects of both cytokine and STAT signaling preclude the ability to precisely attribute molecular changes to either source. In this study, we employ a multi-“omics” approach to deconstruct and...

    Subject
    Cytokines
    Epigenesis, Genetic
    Killer Cells, Natural
    Signal Transduction
    STAT Transcription Factors
    STAT4 Transcription Factor
    STAT5 Transcription Factor
    Access Rights
    Free to All
  • Deconvoluting global cytokine signaling networks in natural killer cells [RNA-Seq]

    Authors
    Lau, Colleen M.
    Sun, Joseph C.
    Description

    Summary from the GEO: "Cytokine signaling via signal transducer and activator of transcription (STAT) proteins is crucial for optimal antiviral responses of natural killer (NK) cells. However, the pleiotropic effects of both cytokine and STAT signaling preclude the ability to precisely attribute molecular changes to either source. In this study, we employ a multi-“omics” approach to deconstruct and...

    Subject
    Cytokines
    Epigenesis, Genetic
    Killer Cells, Natural
    Signal Transduction
    STAT Transcription Factors
    STAT4 Transcription Factor
    STAT5 Transcription Factor
    Access Rights
    Free to all with registration
  • Deconvoluting global cytokine signaling networks in natural killer cells [ATAC-Seq]

    Authors
    Lau, Colleen M.
    Sun, Joseph C.
    Description

    Summary from the GEO: "Cytokine signaling via signal transducer and activator of transcription (STAT) proteins is crucial for optimal antiviral responses of natural killer (NK) cells. However, the pleiotropic effects of both cytokine and STAT signaling preclude the ability to precisely attribute molecular changes to either source. In this study, we employ a multi-“omics” approach to deconstruct and...

    Subject
    Cytokines
    Epigenesis, Genetic
    Killer Cells, Natural
    Signal Transduction
    STAT Transcription Factors
    STAT4 Transcription Factor
    STAT5 Transcription Factor
    Access Rights
    Free to All
  • Divergent role for STAT5 in the adaptive responses of natural killer cells

    Authors
    Lau, Colleen M.
    Sun, Joseph C.
    Description

    Summary from the GEO: "Natural killer (NK) cells are innate lymphocytes with the capacity to elicit adaptive features, including clonal expansion and immunological memory. Because signal transducer and activator of transcription 5 (STAT5) is essential for NK cell development, the role of this transcription factor and its upstream cytokines IL-2 and IL-15 during infection have not been carefully investigated....

    Subject
    Cytokines
    Immunologic Memory
    Interleukin-15
    Interleukin-2
    Killer Cells, Natural
    STAT5 Transcription Factor
    Access Rights
    Free to All
  • Deconvoluting global cytokine signaling networks in natural killer cells

    Authors
    Lau, Colleen M.
    Description

    This super series contains has three subseries with containing datasets of RNA, ATAC and ChIP sequencing. The overall experiment was designed to deconstruct and and rebuild the interaction of major STAT (signal transducer and activator of transcription) signaling pathways in NK cells. The experiment develops some understanding of cytokine signaling pathways as a resource for improving cellular immunotherapy.

    Subject
    Cytokines
    Epigenesis, Genetic
    Signal Transduction
    STAT Transcription Factors
    Access Rights
    Free to All
  • Control of nutrient uptake by IRF4 orchestrates innate immune memory - scRNA-seq

    Authors
    Santosa, Endi K
    Sun, Joseph C.
    Description

    Summary from GEO: "Natural Killer (NK) cells are innate cytotoxic lymphocytes with adaptive immune features, including antigen-specificity, clonal expansion, and memory. As such, NK cells share many transcriptional and epigenetic programs with their adaptive CD8+ T cell siblings. Various signals ranging from antigen, co-stimulation, and proinflammatory cytokines are required for optimal NK cell responses...

    Subject
    CD8-Positive T-Lymphocytes
    Chromatin Immunoprecipitation Sequencing
    Cytokines
    Interferon Regulatory Factors
    Killer Cells, Natural
    RNA-Seq
    Access Rights
    Free to All
  • Control of nutrient uptake by IRF4 orchestrates innate immune memory - ChIP-seq

    Authors
    Santosa, Endi K
    Sun, Joseph C.
    Description

    Summary from GEO: "Natural Killer (NK) cells are innate cytotoxic lymphocytes with adaptive immune features, including antigen-specificity, clonal expansion, and memory. As such, NK cells share many transcriptional and epigenetic programs with their adaptive CD8+ T cell siblings. Various signals ranging from antigen, co-stimulation, and proinflammatory cytokines are required for optimal NK cell responses...

    Subject
    CD8-Positive T-Lymphocytes
    Chromatin Immunoprecipitation Sequencing
    Cytokines
    Interferon Regulatory Factors
    Killer Cells, Natural
    Access Rights
    Free to All
  • Deconstruction of rheumatoid arthritis synovium defines inflammatory subtypes

    Description

    Description from Synapse.org "Rheumatoid arthritis (RA) is a prototypical autoimmune disease that causes inflammation leading to cartilage and bone destruction in joints. Clinical challenges in RA include the empirical selection of drugs to treat patients, inadequate responders with incomplete disease remission, and lack of a cure. We profiled the full spectrum of cells in inflamed synovium from...

    Subject
    Arthritis, Rheumatoid
    Cytokines
    Inflammation
    RNA-Seq
    Single-Cell Analysis
    Access Rights
    Free to All