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Anaplastic Oligodendroglioma and Anaplastic Oligoastrocytoma (MSKCC, Neuro Oncol 2017): Genomic characterization using next generation sequencing (NGS) in 22 Anaplastic Oligodendroglioma and Anaplastic Oligoastrocytomas.
- Authors
- Thomas, Alissa A.Abrey, Lauren E.Terziev, RobertRaizer, Jeffrey J.24 more author(s)...
- Description
This dataset contains summary data visualizations and sequencing data of 22 anaplastic oligodendroglioma (AO) and anaplastic oligoastrocytoma (AOA) tumors from 19 patients following a trial using induction temozolomide (TMZ) followed by myeloablative high-dose chemotherapy (HDC) with autologous stem-cell transplant (ASCT) as a potential strategy to defer radiotherapy. The clinical data includes mutation...
- Subject
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Brain NeoplasmsChemoradiotherapyDNA Mutational AnalysisOligodendrogliomaTemozolomide
- Access Rights
- Free to All
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MSK-IMPACT Clinical Sequencing Cohort (MSKCC, Nat Med 2017): Targeted sequencing of 10,000 clinical cases using the MSK-IMPACT assay
- Description
This dataset contains summary data visualizations and clinical data from the targeted sequencing of 10,000 clinical cases using the MSK-IMPACT assay. The clinical data includes mutation count, information about mutated genes, tumor mutational burden calculations, tissue site from which the sample was derived, tumor purity among other relevant data points. The data set also includes copy-number segment...
- Subject
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AdenocarcinomaAdenocarcinoma of LungAdenocarcinoma, MucinousBreast NeoplasmsCarcinoma, Ductal, BreastCarcinoma, HepatocellularCarcinoma, LobularCarcinoma, Non-Small-Cell LungCarcinoma, Renal CellCarcinoma, Squamous CellCarcinosarcomaCholangiocarcinomaColonic NeoplasmsColorectal NeoplasmsCystadenocarcinoma, SerousDNA Mutational AnalysisGallbladder NeoplasmsGlioblastomaLiposarcomaLung NeoplasmsLymphoma, FollicularMelanomaMesotheliomaNeoplasms, Squamous CellNeurofibromaOligodendrogliomaOsteosarcomaOvarian NeoplasmsPancreatic NeoplasmsProstatic NeoplasmsRectal NeoplasmsSarcomaSarcoma, SynovialSquamous Cell Carcinoma of Head and NeckStomach NeoplasmsThyroid Cancer, PapillaryUrinary Bladder NeoplasmsUterine NeoplasmsUveal Neoplasms
- Access Rights
- Free to All
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Brain Lower Grade Glioma (TCGA, Firehose Legacy)
- Description
TCGA Brain Lower Grade Glioma. Source data from GDAC Firehose. Previously known as TCGA Provisional. This dataset contains summary data visualizations and clinical data from a broad sampling of 530 carcinomas from 516 patients. The data was gathered as part of the Broad Institute of MIT and Harvard Firehose initiative, a cancer analysis pipeline. The clinical data includes mutation count, information...
- Subject
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AstrocytomaBrain NeoplasmsDNA Mutational AnalysisGliomaOligodendroglioma
- Access Rights
- Free to All
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Glioma (MSK, Nature 2019): Targeted Sequencing of CSF samples (91 samples with 86 matched normals) from 42 glioma patients
- Description
This dataset contains the summary data visualizations and clinical data from the targed sequencing of 91 CSF samples from 42 glioma patients. Clinical data includes: Cancer Type, Number of Samples Per Patient, Mutation Count, Fraction Genome Altered Sample Type, Sex, Oncotree Code, Sample Collection Method, Somatic Status, Specimen Preservation Type. The plaintext components of the dataset can be...
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AstrocytomaGlioblastomaGliomaGliosarcomaOligodendroglioma
- Access Rights
- Free to All
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Glioma International Case Control Study (GICC)
- Authors
- Bondy, Melissa L.
- Description
Study Description from dbGaP: "The main goals of the GICC Study were: 1) to identify novel genetic risk variants for glioma, as well as validate variants implicated by previous genome-wide association studies of glioma; and 2) to explore biologically relevant gene-gene and gene-environment interactions in glioma susceptibility." Study Inclusion Criteria: "Diagnosis of histologically confirmed, supratentorial,...
- Subject
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AstrocytomaBrain NeoplasmsGlioblastomaGliomaOligodendroglioma
- Access Rights
- Application Required